Search results for "enzyme dimers"

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Why Are Some Enzymes Dimers? Flexibility and Catalysis in Thermotoga maritima Dihydrofolate Reductase

2019

[Image: see text] Dihydrofolate reductase from Thermotoga maritima (TmDFHFR) is a dimeric thermophilic enzyme that catalyzes the hydride transfer from the cofactor NADPH to dihydrofolate less efficiently than other DHFR enzymes, such as the mesophilic analogue Escherichia coli DHFR (EcDHFR). Using QM/MM potentials, we show that the reduced catalytic efficiency of TmDHFR is most likely due to differences in the amino acid sequence that stabilize the M20 loop in an open conformation, which prevents the formation of some interactions in the transition state and increases the number of water molecules in the active site. However, dimerization provides two advantages to the thermophilic enzyme: …

chemistry.chemical_classificationenzyme kinetic isotope effectsbiology010405 organic chemistryStereochemistryChemistryThermophilefree energy calculationsGeneral Chemistry010402 general chemistrybiology.organism_classificationenzyme dimers01 natural sciencesCatalysisCofactor0104 chemical sciencesCatalysisEnzymeDihydrofolate ReductaseThermotoga maritimaDihydrofolate reductasebiology.proteinbacteriaQM/MM methods
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